Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816584.1_cds_XP_016498865.1_12843
CDS Infomation

[gene=LOC107817526] [db_xref=GeneID:107817526] [protein=type I inositol polyphosphate 5-phosphatase 4-like] [protein_id=XP_016498865.1] [location=complement(join(127286..127508,127675..127823,127941..128049,128157..128350,128433..129060,129150..129254,129348..129435,129543..129614,129949..130036,130126..130155))] [gbkey=CDS]
Sequence

ATGAGAGATGGGAGCTGTAAAAAAACCAAGGTCTCGTGGCCCAAGAGTCTGGTAAAAAAA
TGGTTCAATATCAAGAGTAAAGCTGAGGATTTCCAAGCTGATGATATTGTCTATGGAGGT
GTTGATAATGAATGGAGGAACAACTTCTTAGAGAGGCAGGCTTCCACTAGCAAGAAAAAA
AGTAAAACAGACAAGTCAGGGAGAAGGAATGCTGATCGTTTTCATCGAAATAAGATTGAC
CTTGACACTTCAGAGGTTACAGATGTGGATAACTACCGGATCTTTGTAGCTACATGGAAT
GTGGCTGGAAAATCTCCACCTAGTAATTTAAATCTTGATGATTGGCTCCATACCTCACCT
CCTGCTGACATCTATGTTCTCGGGTTTCAAGAAATTGTTCCTTTGAATGCTGGTAATGTT
TTGGGCACAGAGGACAATGGGCCAGCTAGAAAATGGCTAGCACTCATCCGAAAAACTCTC
AACAGTCTTCCCGGAACAAGTGCTGGTGGTTATCGTACTCCCTCTCCAGTTCCTAATCCT
GTGGTTGAACTAGATGCTGACTTTGAGGGATCGGCAAGAGAACAAGCCTCGTCTTTCTTC
CATCGTCGCTCATTTCAGACATTAAGCCATAGCATGAGAGTAATGGAAAGTGAAATGCCA
ATGCCACGGGCTCAACTTGATCGGCGATTTAGTGTTTGTGATAGAGGTGTGTTTGGGGGA
AGGCCAAGTGATTACGACCCATACGCCCAATGGGGTGGTTCCTCTGATGATGAAAACGGT
CCAGATGATTCACCTATTACGACCCATTGTTCCCCGATTTCATATAGTGGTTCCATCTCT
TTAGAGGACAGAGACAGACAGCCACTGCAATCGAGATACTGTCTTGTTGCGAGCAAGCAA
ATGGTTGGAATATTTCTTACTATTTGGATTAGAAGTGAACTAAGAGACGATGTTCTCAAC
CTGAAAGTGTCTTGTGTTGGTAGAGGATTAATGGGTTATCTAGGGAACAAGGGCTCAATC
TCAGTTAGCATGTCACTGCACCAAACAAGCTTCTGCTTTATTTGTAGTCATTTAACATCT
GGACAGAAAGAGGGAGATGAGCTCCGGAGAAACTCTGATGTCTTGGAGATTCTAAAGAAA
ACAAGGTTTCCAAGGGTTCATGGCTTTTTGGATGACAACTCTCCTCAAACAATCCTCGAG
CACGACCGAATCATATGGCTTGGGGATTTGAACTATCGAATTGCCTTGTCTTACCGAACT
GCCAAGGCACTGGTAGAGATGCGCAATTGGAGGGTGCTGTTAGATAATGATCAGCTGCGG
ATAGAGCAGAGGATGGGACGTGTTTTTAATGGATGGAGTGAAGGAAGAATATACTTCCCC
CCGACGTACAAGTACTCAAGTAATTCAGATAGATATGCAGGAGAGGACACACACCCAAAA
GAGAAACGAAGAACCCCTGCTTGGTGTGATCGCATATTATGGTATGGTCGAGGCCTGCAT
CAAATATCTTATGTTCGTGGAGAGTCTAGATTCTCGGACCATAGACCAGTTTATAGTATA
TTCTTGGCAGAGGTTGAGTCCATCAACCGCCATCGTATCAAGAAAAGTTTGAGCTACGCT
AGCTCTAGGGTTGAAGTTGAAGAGTTATTGCCCCATTCATATGGATATGGTGGACATTAC
TACTAA

Peptide Sequence

PEP ID

XP_016498865.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 4-like [Nicotiana tabacum]
Sequence

MRDGSCKKTKVSWPKSLVKKWFNIKSKAEDFQADDIVYGGVDNEWRNNFLERQASTSKKK
SKTDKSGRRNADRFHRNKIDLDTSEVTDVDNYRIFVATWNVAGKSPPSNLNLDDWLHTSP
PADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSAGGYRTPSPVPNP
VVELDADFEGSAREQASSFFHRRSFQTLSHSMRVMESEMPMPRAQLDRRFSVCDRGVFGG
RPSDYDPYAQWGGSSDDENGPDDSPITTHCSPISYSGSISLEDRDRQPLQSRYCLVASKQ
MVGIFLTIWIRSELRDDVLNLKVSCVGRGLMGYLGNKGSISVSMSLHQTSFCFICSHLTS
GQKEGDELRRNSDVLEILKKTRFPRVHGFLDDNSPQTILEHDRIIWLGDLNYRIALSYRT
AKALVEMRNWRVLLDNDQLRIEQRMGRVFNGWSEGRIYFPPTYKYSSNSDRYAGEDTHPK
EKRRTPAWCDRILWYGRGLHQISYVRGESRFSDHRPVYSIFLAEVESINRHRIKKSLSYA
SSRVEVEELLPHSYGYGGHYY

Transcript Sequence

Gene sequence data has not been registered.